Commit Graph

10 Commits

Author SHA1 Message Date
Jesus Vazquez c1b669bf9b
Add out-of-order sample support to the TSDB (#11075)
* Introduce out-of-order TSDB support

This implementation is based on this design doc:
https://docs.google.com/document/d/1Kppm7qL9C-BJB1j6yb6-9ObG3AbdZnFUBYPNNWwDBYM/edit?usp=sharing

This commit adds support to accept out-of-order ("OOO") sample into the TSDB
up to a configurable time allowance. If OOO is enabled, overlapping querying
are automatically enabled.

Most of the additions have been borrowed from
https://github.com/grafana/mimir-prometheus/
Here is the list ist of the original commits cherry picked
from mimir-prometheus into this branch:
- 4b2198d7ec
- 2836e5513f
- 00b379c3a5
- ff0dc75758
- a632c73352
- c6f3d4ab33
- 5e8406a1d4
- abde1e0ba1
- e70e769889
- df59320886

Co-authored-by: Jesus Vazquez <jesus.vazquez@grafana.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Dieter Plaetinck <dieter@grafana.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* gofumpt files

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Add license header to missing files

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix OOO tests due to existing chunk disk mapper implementation

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix truncate int overflow

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Add Sync method to the WAL and update tests

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* remove useless sync

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Update minOOOTime after truncating Head

* Update minOOOTime after truncating Head

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix lint

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Add a unit test

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Load OutOfOrderTimeWindow only once per appender

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix OOO Head LabelValues and PostingsForMatchers

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix replay of OOO mmap chunks

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Remove unnecessary err check

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Prevent panic with ApplyConfig

Signed-off-by: Ganesh Vernekar 15064823+codesome@users.noreply.github.com
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Run OOO compaction after restart if there is OOO data from WBL

Signed-off-by: Ganesh Vernekar 15064823+codesome@users.noreply.github.com
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Apply Bartek's suggestions

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Refactor OOO compaction

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Address comments and TODOs

- Added a comment explaining why we need the allow overlapping
  compaction toggle
- Clarified TSDBConfig OutOfOrderTimeWindow doc
- Added an owner to all the TODOs in the code

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Run go format

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix remaining review comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix tests

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Change wbl reference when truncating ooo in TestHeadMinOOOTimeUpdate

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix TestWBLAndMmapReplay test failure on windows

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Address most of the feedback

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Refactor the block meta for out of order

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix windows error

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix review comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Signed-off-by: Ganesh Vernekar 15064823+codesome@users.noreply.github.com
Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Dieter Plaetinck <dieter@grafana.com>
Co-authored-by: Oleg Zaytsev <mail@olegzaytsev.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
2022-09-20 22:35:50 +05:30
Bryan Boreham d2701be53a
tsdb: remove chunk pool from memSeries (#11280)
The chunk pool belongs to the head not to the series. Pass it down where
required, and remove the copy of the pointer that `memSeries` was
holding.

`safeChunk` also needs to hold it, because in scenarios where it is used
we don't have a reference to the head. However it was already holding
`chunkDiskMapper` for the same reason, so no big change.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>
2022-09-15 13:22:09 +05:30
Oleg Zaytsev 3947238ce0
Label values with matchers by intersecting postings (#9907)
* LabelValues w/matchers by intersecting postings

Instead of iterating all matched series to find the values, this
checks if each one of the label values is present in the matched series
(postings).

Pending to be benchmarked.

Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>

* Benchmark labelValuesWithMatchers

name                                                                   old time/op    new time/op
Querier/Head/labelValuesWithMatchers/i_with_n="1"                         157ms ± 0%        48ms ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="^.+$"                      1.80s ± 0%       0.46s ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",j!="foo"                144ms ± 0%        57ms ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"      304ms ± 0%       111ms ± 0%
Querier/Head/labelValuesWithMatchers/n_with_j!="foo"                      761ms ± 0%       164ms ± 0%
Querier/Head/labelValuesWithMatchers/n_with_i="1"                        6.11µs ± 0%      6.62µs ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1"                        117ms ± 0%        62ms ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="^.+$"                     1.44s ± 0%       0.24s ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",j!="foo"              92.1ms ± 0%      70.3ms ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"     196ms ± 0%       115ms ± 0%
Querier/Block/labelValuesWithMatchers/n_with_j!="foo"                     1.23s ± 0%       0.21s ± 0%
Querier/Block/labelValuesWithMatchers/n_with_i="1"                       1.06ms ± 0%      0.88ms ± 0%

name                                                                   old alloc/op   new alloc/op
Querier/Head/labelValuesWithMatchers/i_with_n="1"                        29.5MB ± 0%      26.9MB ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="^.+$"                     46.8MB ± 0%     251.5MB ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",j!="foo"               29.5MB ± 0%      22.3MB ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"     46.8MB ± 0%      23.9MB ± 0%
Querier/Head/labelValuesWithMatchers/n_with_j!="foo"                     10.3kB ± 0%  138535.2kB ± 0%
Querier/Head/labelValuesWithMatchers/n_with_i="1"                        5.54kB ± 0%      7.09kB ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1"                       39.1MB ± 0%      28.5MB ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="^.+$"                     287MB ± 0%       253MB ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",j!="foo"              34.3MB ± 0%      23.9MB ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"    51.6MB ± 0%      25.5MB ± 0%
Querier/Block/labelValuesWithMatchers/n_with_j!="foo"                     144MB ± 0%       139MB ± 0%
Querier/Block/labelValuesWithMatchers/n_with_i="1"                       6.43kB ± 0%      8.66kB ± 0%

name                                                                   old allocs/op  new allocs/op
Querier/Head/labelValuesWithMatchers/i_with_n="1"                          104k ± 0%        500k ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="^.+$"                       204k ± 0%        600k ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",j!="foo"                 104k ± 0%        500k ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"       204k ± 0%        500k ± 0%
Querier/Head/labelValuesWithMatchers/n_with_j!="foo"                       66.0 ± 0%       255.0 ± 0%
Querier/Head/labelValuesWithMatchers/n_with_i="1"                          61.0 ± 0%       205.0 ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1"                         304k ± 0%        600k ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="^.+$"                     5.20M ± 0%       0.70M ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",j!="foo"                204k ± 0%        600k ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"      304k ± 0%        600k ± 0%
Querier/Block/labelValuesWithMatchers/n_with_j!="foo"                     3.00M ± 0%       0.00M ± 0%
Querier/Block/labelValuesWithMatchers/n_with_i="1"                         61.0 ± 0%       247.0 ± 0%

Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>

* Don't expand postings to intersect them

Using a min heap we can check whether matched postings intersect with
each one of the label values postings. This avoid expanding postings
(and thus having all of them in memory at any point).

Slightly slower than the expanding postings version for some cases, but
definitely pays the price once the cardinality grows.

Still offers 10x latency improvement where previous latencies were
reaching 1s.

Benchmark results:

name \ time/op                                                         old.txt      intersect.txt    intersect_noexpand.txt
Querier/Head/labelValuesWithMatchers/i_with_n="1"                       157ms ± 0%        48ms ± 0%              110ms ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="^.+$"                    1.80s ± 0%       0.46s ± 0%              0.18s ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",j!="foo"              144ms ± 0%        57ms ± 0%              125ms ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"    304ms ± 0%       111ms ± 0%              177ms ± 0%
Querier/Head/labelValuesWithMatchers/n_with_j!="foo"                    761ms ± 0%       164ms ± 0%              134ms ± 0%
Querier/Head/labelValuesWithMatchers/n_with_i="1"                      6.11µs ± 0%      6.62µs ± 0%             4.29µs ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1"                      117ms ± 0%        62ms ± 0%              120ms ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="^.+$"                   1.44s ± 0%       0.24s ± 0%              0.15s ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",j!="foo"            92.1ms ± 0%      70.3ms ± 0%            125.4ms ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"   196ms ± 0%       115ms ± 0%              170ms ± 0%
Querier/Block/labelValuesWithMatchers/n_with_j!="foo"                   1.23s ± 0%       0.21s ± 0%              0.14s ± 0%
Querier/Block/labelValuesWithMatchers/n_with_i="1"                     1.06ms ± 0%      0.88ms ± 0%             0.92ms ± 0%

name \ alloc/op                                                        old.txt      intersect.txt    intersect_noexpand.txt
Querier/Head/labelValuesWithMatchers/i_with_n="1"                      29.5MB ± 0%      26.9MB ± 0%             19.1MB ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="^.+$"                   46.8MB ± 0%     251.5MB ± 0%             36.3MB ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",j!="foo"             29.5MB ± 0%      22.3MB ± 0%             19.1MB ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"   46.8MB ± 0%      23.9MB ± 0%             20.7MB ± 0%
Querier/Head/labelValuesWithMatchers/n_with_j!="foo"                   10.3kB ± 0%  138535.2kB ± 0%              6.4kB ± 0%
Querier/Head/labelValuesWithMatchers/n_with_i="1"                      5.54kB ± 0%      7.09kB ± 0%             4.30kB ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1"                     39.1MB ± 0%      28.5MB ± 0%             20.7MB ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="^.+$"                   287MB ± 0%       253MB ± 0%               38MB ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",j!="foo"            34.3MB ± 0%      23.9MB ± 0%             20.7MB ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"  51.6MB ± 0%      25.5MB ± 0%             22.3MB ± 0%
Querier/Block/labelValuesWithMatchers/n_with_j!="foo"                   144MB ± 0%       139MB ± 0%                0MB ± 0%
Querier/Block/labelValuesWithMatchers/n_with_i="1"                     6.43kB ± 0%      8.66kB ± 0%             5.86kB ± 0%

name \ allocs/op                                                       old.txt      intersect.txt    intersect_noexpand.txt
Querier/Head/labelValuesWithMatchers/i_with_n="1"                        104k ± 0%        500k ± 0%               300k ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="^.+$"                     204k ± 0%        600k ± 0%               400k ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",j!="foo"               104k ± 0%        500k ± 0%               300k ± 0%
Querier/Head/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"     204k ± 0%        500k ± 0%               300k ± 0%
Querier/Head/labelValuesWithMatchers/n_with_j!="foo"                     66.0 ± 0%       255.0 ± 0%              139.0 ± 0%
Querier/Head/labelValuesWithMatchers/n_with_i="1"                        61.0 ± 0%       205.0 ± 0%               87.0 ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1"                       304k ± 0%        600k ± 0%               400k ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="^.+$"                   5.20M ± 0%       0.70M ± 0%              0.50M ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",j!="foo"              204k ± 0%        600k ± 0%               400k ± 0%
Querier/Block/labelValuesWithMatchers/i_with_n="1",i=~"^.*$",j!="foo"    304k ± 0%        600k ± 0%               400k ± 0%
Querier/Block/labelValuesWithMatchers/n_with_j!="foo"                   3.00M ± 0%       0.00M ± 0%              0.00M ± 0%
Querier/Block/labelValuesWithMatchers/n_with_i="1"                       61.0 ± 0%       247.0 ± 0%              129.0 ± 0%

Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>

* Apply comment suggestions from the code review

Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

* Change else { if } to else if

Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>

* Remove sorting of label values

We were not sorting them before, so no need to sort them now

Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
2021-12-28 15:59:03 +01:00
Darshan Chaudhary 9dcf8b2208
Add the ability to disable tsdb isolation (#9270)
* Disable isolation in isolation struct

Signed-off-by: darshanime <deathbullet@gmail.com>

* Run tsdb tests with isolation disabled

Signed-off-by: darshanime <deathbullet@gmail.com>

* Check for isolation disabled in isoState.Close()

Signed-off-by: darshanime <deathbullet@gmail.com>

* use t.Skip to skip isolation tests when disabled

Signed-off-by: darshanime <deathbullet@gmail.com>

* address review comments

Signed-off-by: darshanime <deathbullet@gmail.com>

* fix test for defaultIsolationState

Signed-off-by: darshanime <deathbullet@gmail.com>

* Change flag name. Set flag in DB. Do not init txRing. Close isoState.

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Test disabled isolation in CircleCI test_go

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Skip isolation related tests in db_test.go

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-11-19 15:41:32 +05:30
Dieter Plaetinck 067efc3725
clarify HeadChunkID type and usage (#9726)
Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
2021-11-17 18:35:10 +05:30
Dieter Plaetinck 0fac9bb859
Add basic initial developer docs for TSDB (#9451)
* Add basic initial developer docs for TSDB

There's a decent amount of content already out there (blog posts,
conference talks, etc), but:
* when they get stale, they don't tend to get updated
* they still leave me with questions that I'ld like to answer
  for developers (like me) who want to use, or work with, TSDB

What I propose is developer docs inside the prometheus
repository.  Easy to find and harness the power of the community
to expand it and keep it up to date.

* perfect is the enemy of good.  Let's have a base and incrementally improve
* Markdown docs should be broad but not too deep.  Source code comments
  can complement them, and are the ideal place for implementation details.

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* use example code that works out of the box

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Apply suggestions from code review

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* PR feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* more docs

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* PR feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Apply suggestions from code review

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Apply suggestions from code review

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

* feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Update tsdb/docs/usage.md

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

* final tweaks

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* workaround docs versioning issue

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Move example code to real executable, testable example.

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* cleanup example test and make sure it always reproduces

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* obtain temp dir in a way that works with older Go versions

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Fix Ganesh's comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-11-17 15:51:27 +05:30
beorn7 c954cd9d1d Move packages out of deprecated pkg directory
This creates a new `model` directory and moves all data-model related
packages over there:
  exemplar labels relabel rulefmt textparse timestamp value

All the others are more or less utilities and have been moved to `util`:
  gate logging modetimevfs pool runtime

Signed-off-by: beorn7 <beorn@grafana.com>
2021-11-09 08:03:10 +01:00
Dieter Plaetinck cda025b5b5
TSDB: demistify SeriesRefs and ChunkRefs (#9536)
* TSDB: demistify seriesRefs and ChunkRefs

The TSDB package contains many types of series and chunk references,
all shrouded in uint types.  Often the same uint value may
actually mean one of different types, in non-obvious ways.

This PR aims to clarify the code and help navigating to relevant docs,
usage, etc much quicker.

Concretely:

* Use appropriately named types and document their semantics and
  relations.
* Make multiplexing and demuxing of types explicit
  (on the boundaries between concrete implementations and generic
  interfaces).
* Casting between different types should be free.  None of the changes
  should have any impact on how the code runs.

TODO: Implement BlockSeriesRef where appropriate (for a future PR)

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* agent: demistify seriesRefs and ChunkRefs

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
2021-11-06 15:40:04 +05:30
Bryan Boreham 87d909df4a
Remove symbols map from TSDB head (#9301)
This saves memory, effort and locking.

Since every symbol is also added to postings, `Symbols()` can be
implemented there instead. This now has to build a map for
deduplication, but `Symbols()` is only called for compaction, and `gc()`
used to rebuild the symbols map after every compaction so not an
additional cost.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>
2021-09-08 14:48:48 +05:30
Ganesh Vernekar 8002a3ab80
Breakdown tsdb/head.go into multiple files (#9147)
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-08-03 14:14:26 +02:00