Extends Appender.AppendHistogram function to accept the FloatHistogram. TSDB supports appending, querying, WAL replay, for this new type of histogram.
Signed-off-by: Marc Tudurí <marctc@protonmail.com>
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Introduce out-of-order TSDB support
This implementation is based on this design doc:
https://docs.google.com/document/d/1Kppm7qL9C-BJB1j6yb6-9ObG3AbdZnFUBYPNNWwDBYM/edit?usp=sharing
This commit adds support to accept out-of-order ("OOO") sample into the TSDB
up to a configurable time allowance. If OOO is enabled, overlapping querying
are automatically enabled.
Most of the additions have been borrowed from
https://github.com/grafana/mimir-prometheus/
Here is the list ist of the original commits cherry picked
from mimir-prometheus into this branch:
- 4b2198d7ec
- 2836e5513f
- 00b379c3a5
- ff0dc75758
- a632c73352
- c6f3d4ab33
- 5e8406a1d4
- abde1e0ba1
- e70e769889
- df59320886
Co-authored-by: Jesus Vazquez <jesus.vazquez@grafana.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Dieter Plaetinck <dieter@grafana.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* gofumpt files
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Add license header to missing files
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Fix OOO tests due to existing chunk disk mapper implementation
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Fix truncate int overflow
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Add Sync method to the WAL and update tests
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* remove useless sync
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Update minOOOTime after truncating Head
* Update minOOOTime after truncating Head
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Fix lint
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Add a unit test
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Load OutOfOrderTimeWindow only once per appender
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Fix OOO Head LabelValues and PostingsForMatchers
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Fix replay of OOO mmap chunks
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Remove unnecessary err check
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Prevent panic with ApplyConfig
Signed-off-by: Ganesh Vernekar 15064823+codesome@users.noreply.github.com
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Run OOO compaction after restart if there is OOO data from WBL
Signed-off-by: Ganesh Vernekar 15064823+codesome@users.noreply.github.com
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Apply Bartek's suggestions
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Refactor OOO compaction
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Address comments and TODOs
- Added a comment explaining why we need the allow overlapping
compaction toggle
- Clarified TSDBConfig OutOfOrderTimeWindow doc
- Added an owner to all the TODOs in the code
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Run go format
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Fix remaining review comments
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Fix tests
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Change wbl reference when truncating ooo in TestHeadMinOOOTimeUpdate
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
* Fix TestWBLAndMmapReplay test failure on windows
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Address most of the feedback
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Refactor the block meta for out of order
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Fix windows error
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Fix review comments
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Signed-off-by: Ganesh Vernekar 15064823+codesome@users.noreply.github.com
Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Dieter Plaetinck <dieter@grafana.com>
Co-authored-by: Oleg Zaytsev <mail@olegzaytsev.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Add runtime config to control native histogram ingestion
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Make the config into a CLI flag
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
- Pick At... method via return value of Next/Seek.
- Do not clobber returned buckets.
- Add partial FloatHistogram suppert.
Note that the promql package is now _only_ dealing with
FloatHistograms, following the idea that PromQL only knows float
values.
As a byproduct, I have removed the histogramSeries metric. In my
understanding, series can have both float and histogram samples, so
that metric doesn't make sense anymore.
As another byproduct, I have converged the sampleBuf and the
histogramSampleBuf in memSeries into one. The sample type stored in
the sampleBuf has been extended to also contain histograms even before
this commit.
Signed-off-by: beorn7 <beorn@grafana.com>
This is to avoid copying the many fields of a histogram.Histogram all
the time.
This also fixes a bunch of formerly broken tests.
Signed-off-by: beorn7 <beorn@grafana.com>
This creates a new `model` directory and moves all data-model related
packages over there:
exemplar labels relabel rulefmt textparse timestamp value
All the others are more or less utilities and have been moved to `util`:
gate logging modetimevfs pool runtime
Signed-off-by: beorn7 <beorn@grafana.com>
A lot of this code was hacked together, literally during a
hackathon. This commit intends not to change the code substantially,
but just make the code obey the usual style practices.
A (possibly incomplete) list of areas:
* Generally address linter warnings.
* The `pgk` directory is deprecated as per dev-summit. No new packages should
be added to it. I moved the new `pkg/histogram` package to `model`
anticipating what's proposed in #9478.
* Make the naming of the Sparse Histogram more consistent. Including
abbreviations, there were just too many names for it: SparseHistogram,
Histogram, Histo, hist, his, shs, h. The idea is to call it "Histogram" in
general. Only add "Sparse" if it is needed to avoid confusion with
conventional Histograms (which is rare because the TSDB really has no notion
of conventional Histograms). Use abbreviations only in local scope, and then
really abbreviate (not just removing three out of seven letters like in
"Histo"). This is in the spirit of
https://github.com/golang/go/wiki/CodeReviewComments#variable-names
* Several other minor name changes.
* A lot of formatting of doc comments. For one, following
https://github.com/golang/go/wiki/CodeReviewComments#comment-sentences
, but also layout question, anticipating how things will look like
when rendered by `godoc` (even where `godoc` doesn't render them
right now because they are for unexported types or not a doc comment
at all but just a normal code comment - consistency is queen!).
* Re-enabled `TestQueryLog` and `TestEndopints` (they pass now,
leaving them disabled was presumably an oversight).
* Bucket iterator for histogram.Histogram is now created with a
method.
* HistogramChunk.iterator now allows iterator recycling. (I think
@dieterbe only commented it out because he was confused by the
question in the comment.)
* HistogramAppender.Append panics now because we decided to treat
staleness marker differently.
Signed-off-by: beorn7 <beorn@grafana.com>
* Update querier.go to support Head compaction with histograms
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Add test for Head compaction with histograms
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Fix tests
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Added walreplay API endpoint
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Added starting page to react-ui
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Documented the new endpoint
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Fixed typos
Signed-off-by: Levi Harrison <git@leviharrison.dev>
Co-authored-by: Julius Volz <julius.volz@gmail.com>
* Removed logo
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Changed isResponding to isUnexpected
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Changed width of progress bar
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Changed width of progress bar
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Added DB stats object
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Updated starting page to work with new fields
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Passing nil
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Passing nil (pt. 2)
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Passing nil (pt. 3)
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Passing nil (and also implementing a method this time) (pt. 4)
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Passing nil (and also implementing a method this time) (pt. 5)
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Changed const to let
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Passing nil (pt. 6)
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Remove SetStats method
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Added comma
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Changed api
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Changed to triple equals
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Fixed data response types
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Don't return pointer
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Changed version
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Fixed interface issue
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Fixed pointer
Signed-off-by: Levi Harrison <git@leviharrison.dev>
* Fixed copying lock value error
Signed-off-by: Levi Harrison <git@leviharrison.dev>
Co-authored-by: Julius Volz <julius.volz@gmail.com>
This moves the label lookup into TSDB, whilst still keeping the cached-ref optimisation for repeated Appends.
This makes the API easier to consume and implement. In particular this change is motivated by the scrape-time-aggregation work, which I don't think is possible to implement without it as it needs access to label values.
Signed-off-by: Tom Wilkie <tom.wilkie@gmail.com>
* Testify: move to require
Moving testify to require to fail tests early in case of errors.
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
* More moves
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
* Refactor test assertions
This pull request gets rid of assert.True where possible to use
fine-grained assertions.
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
## Changes:
* Rename dir when deleting
* Ignoring blocks with broken meta.json on start (we do that on reload)
* Compactor writes <ulid>.tmp-for-creation blocks instead of just .tmp
* Delete tmp-for-creation and tmp-for-deletion blocks during DB open.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
I did not want to move those in previous PR to make it easier to review. Now small cleanup time for readability. (:
## Changes
* Merge series goes to `storage/merge.go` leaving `fanout.go` for just fanout code.
* Moved `fanout test` code from weird separate package to storage.
* Unskiped one test: TestFanout_SelectSorted/chunk_querier
* Moved block series set codes responsible for querying blocks to `querier.go` from `compact.go`
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* tsdb: Added ChunkQueryable implementations to db; unified compactor, querier and fanout block iterating.
Chained to https://github.com/prometheus/prometheus/pull/7059
* NewMerge(Chunk)Querier now takies multiple primaries allowing tsdb DB code to use it.
* Added single SeriesEntry / ChunkEntry for all series implementations.
* Unified all vertical, and non vertical for compact and querying to single
merge series / chunk sets by reusing VerticalSeriesMergeFunc for overlapping algorithm (same logic as before)
* Added block (Base/Chunk/)Querier for block querying. We then use populateAndTomb(Base/Chunk/) to iterate over chunks or samples.
* Refactored endpoint tests and querier tests to include subtests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Addressed comments from Brian and Beorn.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed snapshot test and added chunk iterator support for DBReadOnly.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed race when iterating over Ats first.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed tests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed populate block tests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed endpoints test.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed test.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Added test & fixed case of head open chunk.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed DBReadOnly tests and bug producing 1 sample chunks.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Added cases for partial block overlap for multiple full chunks.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Added extra tests for chunk meta after compaction.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed small vertical merge bug and added more tests for that.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Callbacks for lifecycle of series in TSDB
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
* Add more comments
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
When appending to the head and a chunk is full it is flushed to the disk and m-mapped (memory mapped) to free up memory
Prom startup now happens in these stages
- Iterate the m-maped chunks from disk and keep a map of series reference to its slice of mmapped chunks.
- Iterate the WAL as usual. Whenever we create a new series, look for it's mmapped chunks in the map created before and add it to that series.
If a head chunk is corrupted the currpted one and all chunks after that are deleted and the data after the corruption is recovered from the existing WAL which means that a corruption in m-mapped files results in NO data loss.
[Mmaped chunks format](https://github.com/prometheus/prometheus/blob/master/tsdb/docs/format/head_chunks.md) - main difference is that the chunk for mmaping now also includes series reference because there is no index for mapping series to chunks.
[The block chunks](https://github.com/prometheus/prometheus/blob/master/tsdb/docs/format/chunks.md) are accessed from the index which includes the offsets for the chunks in the chunks file - example - chunks of series ID have offsets 200, 500 etc in the chunk files.
In case of mmaped chunks, the offsets are stored in memory and accessed from that. During WAL replay, these offsets are restored by iterating all m-mapped chunks as stated above by matching the series id present in the chunk header and offset of that chunk in that file.
**Prombench results**
_WAL Replay_
1h Wal reply time
30% less wal reply time - 4m31 vs 3m36
2h Wal reply time
20% less wal reply time - 8m16 vs 7m
_Memory During WAL Replay_
High Churn:
10-15% less RAM - 32gb vs 28gb
20% less RAM after compaction 34gb vs 27gb
No Churn:
20-30% less RAM - 23gb vs 18gb
40% less RAM after compaction 32.5gb vs 20gb
Screenshots are in [this comment](https://github.com/prometheus/prometheus/pull/6679#issuecomment-621678932)
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
This is part of https://github.com/prometheus/prometheus/pull/5882 that can be done to simplify things.
All todos I added will be fixed in follow up PRs.
* querier.Querier, querier.Appender, querier.SeriesSet, and querier.Series interfaces merged
with storage interface.go. All imports that.
* querier.SeriesIterator replaced by chunkenc.Iterator
* Added chunkenc.Iterator.Seek method and tests for xor implementation (?)
* Since we properly handle SelectParams for Select methods I adjusted min max
based on that. This should help in terms of performance for queries with functions like offset.
* added Seek to deletedIterator and test.
* storage/tsdb was removed as it was only a unnecessary glue with incompatible structs.
No logic was changed, only different source of abstractions, so no need for benchmarks.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
Marc Tudurí
Bryan Boreham
Signed-off-by: Jesus Vazquez
Ganesh Vernekar
Jesus Vazquez
beorn7
Eng Zer Jun
Peter Štibraný
Ganesh Vernekar
Levi Harrison
Ben Ye
Tom Wilkie
Dustin Hooten
Marco Pracucci
Julien Pivotto
Bartlomiej Plotka
Arthur Silva Sens
Annanay
Thor
Ganesh Vernekar