diff --git a/libavutil/Makefile b/libavutil/Makefile
index 542a80cd1e..a4d79cdd88 100644
--- a/libavutil/Makefile
+++ b/libavutil/Makefile
@@ -160,6 +160,8 @@ OBJS += $(COMPAT_OBJS:%=../compat/%)
 # Windows resource file
 SLIBOBJS-$(HAVE_GNU_WINDRES)            += avutilres.o
 
+SKIPHEADERS-$(CONFIG_CUDA)             += hwcontext_cuda.h
+SKIPHEADERS-$(CONFIG_VDPAU)            += hwcontext_vdpau.h
 SKIPHEADERS-$(HAVE_ATOMICS_GCC)        += atomic_gcc.h
 SKIPHEADERS-$(HAVE_ATOMICS_SUNCC)      += atomic_suncc.h
 SKIPHEADERS-$(HAVE_ATOMICS_WIN32)      += atomic_win32.h